A modified agar pad method for mycobacterial live-cell imaging
© Williams et al; licensee BioMed Central Ltd. 2011
Received: 13 September 2010
Accepted: 21 March 2011
Published: 21 March 2011
Two general approaches to prokaryotic live-cell imaging have been employed to date, growing bacteria on thin agar pads or growing bacteria in micro-channels. The methods using agar pads 'sandwich' the cells between the agar pad on the bottom and a glass cover slip on top, before sealing the cover slip. The advantages of this technique are that it is simple and relatively inexpensive to set up. However, once the cover slip is sealed, the environmental conditions cannot be manipulated. Furthermore, desiccation of the agar pad, and the growth of cells in a sealed environment where the oxygen concentration will be in gradual decline, may not permit longer term studies such as those required for the slower growing mycobacteria.
We report here a modified agar pad method where the cells are sandwiched between a cover slip on the bottom and an agar pad on top of the cover slip (rather than the reverse) and the cells viewed from below using an inverted microscope. This critical modification overcomes some of the current limitations with agar pad methods and was used to produce time-lapse images and movies of cell growth for Mycobacterium smegmatis and Mycobacterium bovis BCG.
This method offers improvement on the current agar pad methods in that long term live cell imaging studies can be performed and modification of the media during the experiment is permitted.
Modern microscopy instrumentation and techniques permit the study of microorganisms at the single cell level and have been used extensively to study essential bacterial processes such as motility, cell division and the cell cycle. Several methods have been reported for live-cell time-lapse imaging of bacteria which can be crudely divided into two general approaches: growing bacteria on thin agar pads [1–3] or growing bacteria in micro-fluidic chambers [4, 5]. Both have their advantages and limitations.
The use of micro-channels is a sophisticated technique, often combined with micro-fluidic devices, and is consequently a more expensive method that requires specialised equipment and greater operator expertise. A cover slip containing a micro-channel is produced and the cells/culture fluid added to the channel, which is then covered with a porous membrane . In this technique, the system is not sealed so gaseous exchange can occur freely and agents can be added to the culture fluid mid-experiment, so longer and more varied manipulations can be performed. However, micro-fluidic devices usually constrain cell growth to one or two dimensions to allow for single cell tracking, and the cells have to be attached to a substratum strong enough to resist the fluid flow . Furthermore, due to the spatial constraints, daughter cells either have to form as a chain, which is not necessarily the natural pattern for all bacteria, or they detach from the substrata and are lost in the flow . Finally, the physical constraint in micro-channels may prevent significant aspects of cell division from occurring, such as snapping in rod-shaped actinomycetes .
Agar pad methods consist of bacterial cells sandwiched between a thin agar pad and a glass cover slip on top, which is then sealed. The advantages of this technique are that it is simple, relatively inexpensive to set up and there are no physical barriers allowing expansive growth. However, the environmental conditions cannot be manipulated which limits the variety of experiments that can be performed and the growth of aerobic cells may be affected in a sealed environment. The agar pad itself is also prone to desiccation over time hampering longer term experiments . This technique is therefore best suited to short time studies where no manipulation of the culture conditions is required.
Time-lapse imaging of bacteria using existing agar pad methods have been used successfully to study a number of bacteria including Escherichia coli , Corynebacterium glutamicum , Vibrio cholerae , Caulobacter crescentus  and Pseudomonas aeruginosa . However, time-lapse imaging movies of the slower growing mycobacteria using existing agar pad methods are yet to be reported. Here we report the development of a modified agar pad method which overcomes some of the limitations of current protocols and present bacterial imaging and movie data obtained using this method.
Materials and methods
Mycobacterium smegmatis mc2155, and Mycobacterium bovis BCG Pasteur were grown aerobically at 37°C with shaking at 180 rpm and 100 rpm, respectively, in Hartmans-de Bont minimal media . The bacterial strain for live-cell imaging was grown to mid-log phase and a 200 μl aliquot of the bacterial suspension applied to an uncoated 35 mm petri dish that has a 15 mm diameter circle removed from the bottom of the dish and a borosilicate glass cover slip fixed to the underside of the dish creating a shallow 15 mm diameter well (commercially available from Matek). After 5 minutes, the liquid was removed by aspiration leaving a thin film of bacterial cells attached to the cover slip. A 3 ml aliquot of molten (37°C) top agar (standard growth media containing 0.6% Noble agar (Sigma)) was then added to the dish. The dish was left at room temperature for 45 mins to ensure complete solidification of the agar before mounting the specimen on the microscope within Perspex housing to maintain an ambient temperature of 37°C. The cells were viewed and images captured using a Zeiss Axiovert 200 inverted wide-field microscope fitted with an EM-CCD (C9100-02) camera (Hammamatsu). Automated image capture was performed using SimplePCI Compix software.
Results and discussion
Our aim was to develop a simple and reliable method for single-cell time-lapse imaging of bacteria that could be used with both bright-field and fluorescence microscopy, permitted manipulation of the media during the experiment and allowed imaging of the slower growing mycobacteria.
We have developed a relatively simple and inexpensive method for time-lapse imaging single mycobacterial cells, which can also be applied to most other bacterial species. Fundamental issues such as bacterial growth patterns, protein localisation dynamics, antibiotic action and bacterial persistence could be studied using this technique. This method allows imaging over longer times (>65 hours), can be used in combination with fluorescence microscopy and permits the manipulation of environmental conditions during the imaging process. Furthermore, with the availability of multi-well glass-bottomed plates and automated microscope stages, this method is amenable to higher throughput analyses.
This work was funded by BBSRC-DTA studentship to GJ. Thank you to Martin Spitaler and Christian Liebig of the Facility for Imaging by Light Microscopy (FILM) for their assistance with optimising image-capture for live-cell imaging studies and to Samantha Sampson for critical review of the manuscript.
- Fiebig A: Fine-scale time-lapse analysis of the biphasic, dynamic behaviour of the two Vibrio cholerae chromosomes. Molecular Microbiology. 2006, 60 (5): 1164-1178. 10.1111/j.1365-2958.2006.05175.x.PubMedPubMed CentralView Article
- Letek M: Cell growth and cell division in the rod-shaped actinomycete Corynebacterium glutamicum. Antonie van Leeuwenhoek. 2008, 94 (1): 99-109. 10.1007/s10482-008-9224-4.PubMedView Article
- Thanbichler M, Shapiro L: MipZ, a spatial regulator coordinating chromosome segregation with cell division in Caulobacter. Cell. 2006, 126 (1): 147-162. 10.1016/j.cell.2006.05.038.PubMedView Article
- Steel C: Single live cell imaging of chromosomes in chloramphenicol-induced filamentous Pseudomonas aeruginosa. Biochemistry. 2004, 43 (1): 175-182. 10.1021/bi035341e.PubMedView Article
- Kyriacou SV: Single live cell imaging for real-time monitoring of resistance mechanism in Pseudomonas aeruginosa. J Biomed Opt. 2002, 7 (4): 576-86. 10.1117/1.1506707.PubMedView Article
- Ducret A: A microscope automated fluidic system to study bacterial processes in real time. PLoS One. 2009, 4 (9): e7282-10.1371/journal.pone.0007282.PubMedPubMed CentralView Article
- Bernhardt TG, de Boer PAJ: SimA, a nucleoid-associated, FtsZ binding protein required for blocking septal ring assembly over chromosomes in E. coli. Molecular Cell. 2005, 18 (5): 555-564. 10.1016/j.molcel.2005.04.012.PubMedPubMed CentralView Article
- Hartmans SaJAMDB: The genus Mycobacterium - nonmedical. The prokaryotes, a handbook on the biology of bacteria: ecophysiology, isolation, identifcation, application. Edited by: Balows HGTA, Dworkin M, Harder W, Schleifer KH. 1992, New York: Springer-Verlag New York Inc, II:
This article is published under license to BioMed Central Ltd. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.