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Table 9 Amino acid substitution of the NB protein

From: Genetic characterisation of influenza B viruses detected in Singapore, 2004 to 2009

 

Transmembrane domain

Ecto domain

 

21

22

24

29

30

31

34

35

43

48

67

92

B Yamagata 16 1988

V

I

T

F

T

V

T

V

F

N

P

L

Rest of DSO Specimens

I

.

.

.

I

.

.

I

P

Y

.

.

DSO 070214 2006

I

.

I

.

I

I

.

I

L

.

.

.

DSO 050091 2006

I

.

I

.

I

I

.

I

L

.

.

.

DSO 020147 2007

I

.

I

.

I

I

.

I

L

.

.

.

DSO 020132 2007

I

.

I

.

I

I

.

I

L

.

.

.

DSO 020114 2007

I

.

I

.

I

I

.

I

L

.

.

.

DSO 020113 2007

I

.

I

.

I

I

.

I

L

.

.

.

DSO 050528 2005

I

.

.

.

I

.

.

I

P

Y

.

F

DSO 0003 2009

I

.

.

.

I

.

.

I

.

Y

S

I

DSO 0005 2009

I

.

.

.

I

.

.

I

.

Y

S

I

DSO 0070 2009

I

.

.

.

I

.

.

I

.

Y

S

I

DSO 0100 2009

I

.

.

.

I

.

.

I

.

Y

S

I

B Singapore 04 1991

.

T

.

L

I

.

.

.

L

Y

.

.

B Singapore 11 1994

A

.

.

.

.

.

.

.

.

Y

.

.

B Singapore 22 1998

.

.

.

.

.

.

I

I

.

Y

.

.

B Singapore 31 1998

.

.

.

.

.

.

I

I

.

Y

.

.

B Singapore 35 1991

.

.

.

.

.

.

.

I

.

Y

.

.

B Singapore 222 1979

.

.

.

.

.

.

.

.

.

Y

.

.

Vacc04S B Hong Kong 330 2001

.

.

.

L

.

.

.

.

.

.

.

F

Vacc0405N 05S B Jilin 20 2003

.

.

.

.

.

.

.

I

.

.

.

.

Vacc0405N 05S B Shanghai 361 2002

.

.

.

.

.

.

.

I

.

.

.

.

Vacc0608NS B Malaysia 2506 2004

I

.

.

.

I

.

.

I

P

Y

.

.

Vacc0506N B Jiangsu 10 2003

.

.

.

.

.

.

.

I

.

.

.

.

Vacc0809NS B Florida 4 2006

.

.

.

.

I

.

.

I

.

.

.

.

Vacc0912NS B Brisbane 60 2008

.

.

.

.

I

I

.

I

L

.

.

.

Vacc1213N B Wisconsin 01 2010

.

.

.

.

I

.

.

I

.

.

.

.

B Lee 40

I

I

T

L

T

V

I

V

F

N

P

L

B Victoria 02 1987

V

I

T

L

I

V

T

V

F

N

P

L

  1. Amino acid 21–35 correspond to the putative transmembrane domain of the NB protein while positions 43–92 are located on the ecto domain of the protein. Specimens listed under B Yamagata 16 88 belong to the Yamagata. Rest of DSO Specimens: rest of specimens sequenced in this study not individually listed in this table. Identical amino acids are marked by a dot (.).
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BMC Research Notes

ISSN: 1756-0500

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