Table 2 SNPs concordant with the polled trait in the Holstein panel.1
From: Single nucleotide polymorphisms concordant with the horned/polled trait in Holsteins
Gene | SNP Name | SNP Alleles | SNP Type | NCBI dbSNP |
|---|---|---|---|---|
IFNAR2 | bCLCVS1_TC_238 | C (polled) T (horned) | intron | ss105143724 |
SYNJ1 | bSYNJ1_CT_271 | T (polled) C (horned) | intron | ss105143725 |
SYNJ1 | bSYNJ1_CT_131 | T (polled) C (horned) | intron | ss105143726 |
SYNJ1 | bSYNJ1_AG_244 | G (polled) A (horned) | intron | ss105143727 |
SYNJ1 | bSYNJ1_C3981T | T (polled) C (horned) | 3'UTR | ss105143728 |
n/a | bCLF1O1_GA_193 | A (polled) G (horned) | inter-genic | ss105143729 |
C21orf59 | bC2159_C-193T | T (polled) C (horned) | 5'UTR | ss105143730 |
C21orf59 | bC2159_T372C | C (polled) T (horned) | synonymous | ss105143731 |
C21orf63 | bC2163_AG_454 | G (polled) A (horned) | intron | ss105143732 |
C21orf63 | bC2163_GA_333 | A (polled) G (horned) | intron | ss105143733 |
C21orf63 | bC2163_GA_252 | G (polled) A (horned) | intron | ss105143734 |
C21orf63 | bC2163_AC_126 | A (polled) C (horned) | intron | ss105143735 |
C21orf63 | bC2163_CT_145 | C (polled) T (horned) | intron | ss105143736 |