Table 2 SNPs concordant with the polled trait in the Holstein panel.1
From: Single nucleotide polymorphisms concordant with the horned/polled trait in Holsteins
| Gene | SNP Name | SNP Alleles | SNP Type | NCBI dbSNP |
|---|---|---|---|---|
| IFNAR2 | bCLCVS1_TC_238 |
C (polled) T (horned) | intron | ss105143724 |
| SYNJ1 | bSYNJ1_CT_271 |
T (polled) C (horned) | intron | ss105143725 |
| SYNJ1 | bSYNJ1_CT_131 |
T (polled) C (horned) | intron | ss105143726 |
| SYNJ1 | bSYNJ1_AG_244 |
G (polled) A (horned) | intron | ss105143727 |
| SYNJ1 | bSYNJ1_C3981T |
T (polled) C (horned) | 3'UTR | ss105143728 |
| n/a | bCLF1O1_GA_193 |
A (polled) G (horned) | inter-genic | ss105143729 |
| C21orf59 | bC2159_C-193T |
T (polled) C (horned) | 5'UTR | ss105143730 |
| C21orf59 | bC2159_T372C |
C (polled) T (horned) | synonymous | ss105143731 |
| C21orf63 | bC2163_AG_454 |
G (polled) A (horned) | intron | ss105143732 |
| C21orf63 | bC2163_GA_333 |
A (polled) G (horned) | intron | ss105143733 |
| C21orf63 | bC2163_GA_252 |
G (polled) A (horned) | intron | ss105143734 |
| C21orf63 | bC2163_AC_126 |
A (polled) C (horned) | intron | ss105143735 |
| C21orf63 | bC2163_CT_145 |
C (polled) T (horned) | intron | ss105143736 |
