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Table 1 The content of the datasets and the query lists used for PRIDE testing

From: Progress in the PRIDE technique for rapidly comparing protein three-dimensional structures

Dataset Number of domains in the dataset Number of histograms used for the domain structure representation Number of domains in the query list
    E* D** Total
    α β α/β α β α/β  
1 29 098 > 30 24 25 25 25 25 25 149
2 4 937 10 – 30 6 6 6 8 8 8 42
  1. *E corresponds to the "easy" cases when the queries belong to highly populated groups of investigated datasets containing at least 50 domains at the homologous superfamily classification level of CATH;
  2. **D corresponds to the "difficult cases" when queries belonged to small groups having no more than 3 domains at the homologous superfamily classification level of CATH