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Table 3 Prediction accuracies delivered by alternative predictors with the 89 benchmark protein chains extracted from the EVA server.

From: Prediction of protein secondary structures with a novel kernel density estimation based classifier

  Q3 Q3H_O Q3H_P Q3E_O Q3E_P Q3C_O Q3C_P SOV SOVH SOVE SOVC
Prote2S 76.7% 74.1% 79.1% 71.4% 76.6% 84.9% 72.3% 71.7% 75.6% 74.2% 73.3%
Errsig 1.3% 2.7% 2.7% 3.2% 3.5% 1.3% 1.7% 1.9% 2.6% 3.2% 1.6%
PSIPRED 77.4% 78.3% 79.1% 71.5% 78.5% 77.3% 77.0% 73.7% 75.7% 73.8% 72.4%
Errsig 1.2% 3.0% 2.5% 3.1% 2.9% 1.4% 1.5% 1.6% 2.9% 3.1% 1.6%
PROFsec 76.9% 76.0% 82.1% 75.8% 72.3% 79.7% 73.6% 73.9% 78.4% 78.0% 71.6%
Errsig 1.1% 2.5% 2.5% 2.6% 3.2% 1.3% 1.4% 1.6% 2.5% 2.6% 1.7%
PHDpsi 75.5% 80.8% 76.5% 70.4% 70.3% 75.0% 75.8% 70.9% 78.2% 71.7% 69.4%
Errsig 1.3% 2.4% 2.7% 3.0% 3.4% 1.5% 1.5% 1.7% 2.5% 3.0% 1.9%
SABLE2 76.5% 75.5% 77.3% 70.9% 65.4% 80.6% 73.7% 71.8% 76.3% 72.9% 70.7%
Errsig 1.2% 2.7% 2.9% 3.0% 3.8% 1.2% 1.5% 1.7% 2.7% 3.1% 1.7%
PROF_king 72.0% 64.1% 82.5% 72.0% 66.2% 79.2% 69.1% 66.3% 65.3% 73.0% 68.4%
Errsig 1.2% 3.2% 2.6% 3.1% 3.5% 1.2% 1.7% 1.8% 3.3% 3.2% 1.8%