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Table 2 Sequences representing the XXY ESE in CD44v3

From: Conservation of CD44 exon v3 functional elements in mammals

XXY ID

Sequence (XX_Y)

N Species

freq (%)

N changes*

1

AAaTGAAGAAAAcGAAGA_ATGAAGA

2

2.11

2

2

AAaTGAAGAAAATGAAGA_ATGAAGA

27

28.42

1

3

AAaTGAAGAAAATGAAGA_ATGAgGA

2

2.11

2

4

AAaTGAAGAcAATGAAGA_ATGAAGA

3

3.16

2

5

AAaTGAgGAAAATGAAGA_ATGAAGA

1

1.05

2

6

AACaGAAGAAAAcGAAGA_ATGAAGA

2

2.11

2

7

AACcGAAGAAAAcGAAGA_ATGAAGA

1

1.05

2

8

AACTGAAGAAAAcGAAGA_ATGAAGA

11

11.58

1

9

AACTGAAGAAAATGAAGA_AcGAAGA

1

1.05

1

10

AACTGAAGAAAATGAAGA_ATGAAGA

40

42.11

0

11

AACTGAAGAcAATGAAGA_ATGAAGA

3

3.16

1

12

cAgTGAAGAAAATGAAGA_ATGAAGA

1

1.05

2

13

cAgTGAAGAtAAcGAAGA_ATGAAGA

1

1.05

4

  1. Each XXY sequence is represented by an identification number (XXY ID). Variable positions relative to most common sequence (#10) are indicated in lower case. Number of species representing each sequence and its relative frequency are displayed.
  2. *Total number of changes relative to #10.