Skip to main content
Figure 4 | BMC Research Notes

Figure 4

From: SigWin-detector: a Grid-enabled workflow for discovering enriched windows of genomic features related to DNA sequences

Figure 4

Genome-wide RIDGES in a human transcriptome map (HTM). Genome-wide RIDGEOGRAMS per chromosome for the HTM based on the UCSC release hg18 [4]. The expression levels are mapped to gene number. Each RIDGEOGRAM displays a composite of both RIDGES (red-shades) and anti-RIDGEs (blue-shades) for different mmFDR rate levels: 10% (lighter shade), 5%, 1%, and 0.5% (darker shade). All the different window sizes are depicted because they give different specific results. In general, small windows suffer from noise and large windows suffer from lack of detail.

Back to article page