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Table 1 Examples of SeqS searches on DNA sequences totalling 170 MB. All searches took less than 4 seconds

From: Sequence Searcher: A Java tool to perform regular expression and fuzzy searches of multiple DNA and protein sequences

Fuzzy Search Regular Expression Search
Search Pattern No. of mismatches No. of hits Search Pattern No. of hits
ACGTACGTA 0 44 ACGTACGT 216
ACGTACGTA 1 1808 ACGACGTA 108
ACGTACGTA 2 22124 ACGACGT 244
ACGTACGTACGT 1 24 ACGA [CGTA]GT 948
ACGTACGTACGT 2 672 ACGA.G{1,3}T 1272
ACGTACGTACGTACGT 3 80 ACGA.{1,50}G{1,3}T 23991