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Table 1 Execution Time

From: Accelerating epistasis analysis in human genetics with consumer graphics hardware

Data set size Host Time 1 Time 2 Time 3 Avg time Std. dev time
1600 × 1000 3 GPU 72.639 72.649 72.611 72.633 0.016
1600 × 1000 2 GPU 102.243 102.228 102.276 102.249 0.020
1600 × 1000 1 GPU 193.319 193.243 193.207 193.256 0.047
1600 × 1000 8 core (Java) 11676.730 13782.761 9766.305 11741.932 1640.359
1600 × 1000 4 core (Java) 18656.208 19251.764 14188.972 17365.648 2259.369
1600 × 1000 4 core (C++; cluster) 2664.016 2198.369 2306.662 2389.682 198.957
1600 × 1000 16 core (C++; cluster) 669.783 668.732 660.090 666.202 4.343
1600 × 1000 32 core (C++; cluster) 335.186 301.622 359.725 332.178 23.816
1600 × 1000 80 core (C++; cluster) 129.589 129.171 129.815 129.525 0.267
1600 × 1000 150 core (C++; cluster) 67.660 69.814 69.938 69.137 1.046
  1. The execution times of various hosts calculating all three-way interactions of a particular data set. The times are all as reported by the Unix time(1) command.