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Table 1 Primers used for J. onca cDNA and genomic PCR.

From: The opsin repertoire of Jenynsia onca: a new perspective on gene duplication and divergence in livebearers

Opsin category

Primer Name

Sequence

SWS1

SWS1Fw1

5'-AACTACATCYTGGTMAACATCTCC-3'

 

SWS1Rev2

5'-GAACTGTTTGTTCATGAAGGCG-3'

SWS2

SWS2Fw1

5'-GYACWATTCAATACAAGAARC-3'

 

SWS2Rev2

5'-TCTCWGCCTTCTGGGTKGAGGC-3'

 

SWS2AFw1

5'-GTCCACCCGAGTCATAGAGC-3'

 

SWS2ARev2

5'-GCCCACGGTTGTTGACAAC-3'

RH2

RH2Fw1

5'-AACTTCTAYATCCCGWTGTCC-3'

 

RH2Rev1

5'-AGCATGCAGTTACGGACTG-3'

 

RH2-2Fw1

5'-CAACAGGACGGGCTGGTGAGG-3'

 

RH2-2Rev3

5'-ACCCATTCCAATTGTTGCC-3'

RH1

RH1Fw2

5'-GGAGTCCTTATGAATATCCTCAG-3'

 

RH1Rev2

5'-CCTGTTGCTCCATTTATGCAGG-3'

LWS

Fw100

5'-GATCCCTTTGAAGGACCAAACT-3'

 

Fw1a

5'-TCTTATCAGTCTTCACCAACGG-3'

 

RevEnd

5'-TTATGCAGGAGCCACAGAGG-3'

 

Rev8

5'-GCCCACCTGTCGGTTCATGAAG-3'