Table 1 List of pear EST-based SSR markers tested in apple.
From: Update on comparative genome mapping between Malus and Pyrus
SSR locus | accession | Location on pear consensus map | Location on apple consensus map | Forward primer (5'-3') | Reverse primer (5'-3') |
|---|---|---|---|---|---|
TsuENH001 | AB450689 | LG2 | LG2 | AAAGACGGCATTGACTGGATAGA | gtttcttGATGCAAAGACTTTCGCCTATCT |
TsuENH004 | AB450692 | LG4, 12 | LG4 | CGCATTAAAGTCTGGCTTTCTTC | gtttcttGAATTGGCAGAGAGATTGAGTGG |
TsuENH008 | AB450696 | LG9 | LG13 | CTGAGGTCTCATTCGGTGATTCT | gtttcttCCTTCTCTGCTTTCTTCTTCACG |
TsuENH011 | AB450698 | LG6, 14 | LG6 | CGCTTATCCGTTAAACTTCA | gtttcttCAACGACAGTTCGAATAGGA |
TsuENH016 | AB450701 | LG15 | LG15 | TCATTTCATGGACTCTCAATCTCC | gtttcttCGAGGAGTCTGTCTGCGTCT |
TsuENH022 | AB450705 | LG16 | LG16 | CCAATTCATCGAAGTTTACATAGGG | gtttcttGGCCAAAGTGCATGAGATGTAGT |
TsuENH023 | AB450706 | LG3 | LG3 | TCTTCTTCACAGGTCACAACAGC | gtttcttCTATGCGCTGCTTCTTGGTAGTC |
TsuENH031 | AB450711 | LG14 | LG14 | CATTTCCTTAGCTCCCTCCAGTT | gtttcttGAACCTTCCTCTTCCCATCACTT |
TsuENH032 | AB450712 | LG14 | LG14 | AACTGGAGGGAGCTAAGGAAATG | gtttcttCATCAAACAAAACTAGCCGAACC |
TsuENH033 | AB450713 | LG17 | LG17 | CCTGAGGTTATTGACCCAAAAGA | gtttcttGGTGGATACTCACTCAGTTGGAAA |
TsuENH034 | AB450714 | LG8 | LG8 | GCCCCCAATATTTTCCCATTAT | gtttcttGTTGGTGTTTGAGTCAACGTGAG |
TsuENH042 | AB450718 | LG13, 16 | LG16 | AAAGCCGTACATTAGGCAAACC | gtttcttAAAACTAGAACAGGCAGCCACAG |
TsuENH043 | AB450719 | LG10 | LG10 | CATCTGCGTCCGGCAAAC | gtttcttGCCCCCTGATATTCGTGGAT |
TsuENH046 | AB450722 | LG6 | LG6 | GGTCATCACCCACTTAAAAACCA | gtttcttGTGCCCTGAAGTAATTGAGATGG |
TsuENH049 | AB450724 | LG1 | LG1 | CATCAGCCTACGAGCACATACAC | gtttcttAGATTACGGCAACAGCAACAGAT |
TsuENH052 | AB450726 | LG13, LG16 | CCCAGCAGCCTCCTAATCAATA | gtttcttTAGTTGTAGTCCTGCCCAAGTCC | |
TsuENH058 | AB450730 | LG14 | LG14 | AGAAGAAGGATAAGAAGAAGGATGG | gtttcttGTAACGAAAAGGAAACAGGACTTG |
TsuENH060 | AB450732 | LG10 | ATCTCCACCCAAGAAACCTTACC | gtttcttGGGGGTGAGGAATAGATGTAACC | |
TsuENH062 | AB450733 | LG2 | LG2 | ACTCAGATCGTACGCAGAACAAA | gtttcttCGATAAAGATCGATAATCCTCATGC |
TsuENH066 | AB450736 | LG13 | GTGGTGGAGGTGCGTATTGAC | gtttcttCGAGGAAAAGTGCGACTCGT | |
TsuENH068 | AB450738 | LG5 | CCAATTTTCTCTTCCTCCCTGTT | gtttcttTTACAGTTATTGCCGAAGCCAAG | |
TsuENH076 | AB450743 | LG10 | CATTAATACGCTGCTGTTTCTGC | gtttcttACTTGAATTGGGGTAGGGATTGT | |
TsuENH079 | AB450745 | LG16 | LG13 | GCGGCTTCTTGGGAGAAGGT | gtttcttGCATGCTCCTTTTGACAGCCTAC |
TsuENH081 | AB450747 | LG13 | GCTCTCCTCTTCTTCTCCCACTC | gtttcttCCACCCTCGTCAAAATCAGAGTA | |
TsuENH082 | AB450748 | LG11 | CACCAGTACTCCTGGAGGGTTTC | gtttcttGTGCTCCTGCAACATTTTCTCC | |
TsuENH083 | AB450749 | LG11 | LG11 | ACTCTCCGCAAAACAATGTCGTA | gtttcttTGTGAGAGTTTGAGGAGGAGAGC |
TsuENH086 | AB450751 | LG5 | LG5 | CTCTGTTCTGCTTCGATTCTGCT | gtttcttGTCCACGTTCACCATTTTTCAGT |
TsuENH093 | AB450757 | LG15 | LG8, LG15 | GTGGAGATTTTCCGAGTCAAATG | gtttcttAATAAGACTGCTGAGGGAATCCA |
TsuENH096 | AB450759 | LG15 | LG8 | AGTGAGAGAGAGAGGCCTTGGTT | gtttcttGCTCTTGCTCTGTCTTCGAAATG |