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Table 3 Taxa included in phylogenetic analysis

From: TIR-NBS-LRR genes are rare in monocots: evidence from diverse monocot orders

Species

Number used for tree

Pfam seed sequence

Arabidopsis thaliana

8

6

Amborella trichopoda

1

 

Carex blanda

4

 

Coffea canephora

4

 

Cryptomeria japonica

1

 

Cycas revoluta

1

 

Dracaena marginata

3

 

Elaeis guineensis

4

 

Linum usitatissimum

1

1

Musa acuminata

1

 

Nuphar advena

2

 

Oryza sativa

1

 

Persea americana

2

 

Physcomitrella patens

1

 

Pinus lambertina

1

 

Pinus monticola

5

 

Pinus taeda

2

 

Sansevieria trifasciata

2

 

Solanum lycopersicum

2

3

Spathiphyllum

3

 

Triticum-Thinopyrum

1

 

Zingiber cernuum

1

 

Zingiber officinale

2

 

Total

53

10

  1. Number of sequences from each plant species used in phylogenetic analysis. The number from each species used in the Pfam seed sequence is shown for comparison.
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BMC Research Notes

ISSN: 1756-0500

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