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Table 1 Frequency of fecal shedding at different time point as detected by IS900 PCR and isolation and rate of reduction between pre-intervention sampling and last control.

From: Significant reduction in bacterial shedding and improvement in milk production in dairy farms after the use of a new inactivated paratuberculosis vaccine in a field trial

IS900-PCR

AI0

PI1

PI2

PI4

    

Herd

n

%

n

%

n

%

n

%

Herd shedding reduction

P

Strategy reduction

p

T&C

HER

196

7.65

195

4.62

182

2.20

 

-

71.1%

0.0126

60.4%

0.0039

 

URI

144

9.72

176

9.09

143

4.90

 

-

49.6%

0.0890

  
 

AGE

76

17.11

76

2.63

79

2.53

 

-

85.2%

0.0019

  

VAC

END

0

-

0

-

64

3.13

71

0.0

100.0%*

0.2229

  
 

SAG

46

32.56

48

0.00

34

5.88

 

-

81.9%

0.0036

85.8%

<0.0001

 

SAL

63

15.87

60

20.00

65

1.54

 

-

90.3%

0.0037

  

MAP isolation

AI0

PI1

PI2

PI4

    

Herd

n

%

n

%

n

%

  

Herd shedding reduction

P

Strategy reduction

P

T&C

HER

193

6.74

195

3.59

182

1.65

  

75.4%

0.0127

45.5%

0.0760

 

URI

143

4.20

176

4.55

143

4.90

  

-16.7%

0.7140

  
 

AGE

76

2.63

76

2.63

79

0.00

-

-

100.0%

0.2388

  

VAC

END

88

7.95

50

10.00

64

3.13

71

0.0

100.0%*

0.0142

  
 

SAG

46

0

48

0.00

38

5.26

  

-

0.1981

68.2%

0.0243

 

SAL

63

7.94

60

1.67

65

0.00

  

100.0%

0.0266

  
  1. T&C: Testing and culling; VAC: Vaccination; HER, URI, AGE, END, SAG, SAL: Herd codes; AI0: Ante-intervention sampling; PI1: First post-intervention sampling; PI2: Second post-intervention sampling (includes 48 months control for farm END); PI4: Fourth post-intervention sampling (corresponds to 60 months post-intervention only for END). Reduction is calculated as the quotient of the difference in proportions to the initial proportion. * Herd reduction calculated at the last control for END. p: Fisher exact test probability of the difference being due to chance.