Marker/Alleles* | Chromosome | Location | Call rate | Major Allele Frequency-Caucasians | Major Allele Frequency - African Americans | Major Allele Frequency difference between Caucasians vs. African Americans, χ2 (p-value) |
---|---|---|---|---|---|---|
RS2814778 A/G | 1 | 157441307 | 0.93 | 0.9 | 0.2 | 352.5 (0.000003) |
RS6003 A/G | 1 | 195297644 | 0.92 | 0.9 | 0.4 | 195.6 (0.000002) |
RS2065160 C/T | 1 | 203057600 | 0.91 | 0.9 | 0.6 | 85 (0.000001) |
RS2752 G/T | 1 | 232580494 | 0.92 | 0.5 | 0.8 | 68.3 (0.000001) |
RS3287 A/G | 2 | 54661161 | 0.93 | 0.7 | 0.4 | 64.5 (0.000001) |
RS1824347 A/GΨ | 4 | 174001152 | 0.85 | 0.5 | 0.9 | 120.1 (0.000001) |
RS3309 A/T | 5 | 56128536 | 0.95 | 0.7 | 0.6 | 7.9 (0.005) |
RS3317 A/G | 5 | 112240050 | 0.93 | 0.5 | 0.8 | 69.5 (0.000001) |
RS877826 A/CΨ | 5 | 138646696 | 0.83 | 0.3 | 0.8 | 156.9 (0.000002) |
RS3340 A/G | 5 | 153812060 | 0.91 | 0.8 | 0.9 | 13.4 (0.0002) |
RS1928533 C/TΨ | 6 | 45617802 | 0.88 | 0.4 | 0.7 | 60.7 (0.000001) |
RS1016461 C/TΨ | 6 | 69092970 | 0.85 | 0.5 | 0.8 | 63.2 (0.000001) |
RS1538956 G/TΨ | 6 | 127005719 | 0.81 | 0.6 | 0.8 | 29.3 (0.00001) |
RS2763 C/G | 7 | 556186 | 0.90 | 0.9 | 0.8 | 13.6 (0.0002) |
RS2161 A/G | 7 | 97930442 | 0.94 | 0.7 | 0.5 | 29.9 (0.00001) |
RS2740574 A/G | 7 | 99220032 | 0.92 | 0.9 | 0.4 | 194.7 (0.000001) |
RS285 C/T | 8 | 19859469 | 0.89 | 0.5 | 0.8 | 66.0 (0.000001) |
RS1888952 C/TΨ | 9 | 16248118 | 0.83 | 0.5 | 0.8 | 62.0 (0.000001) |
RS594689 A/G | 11 | 65392135 | 0.93 | 0.5 | 0.8 | 69.1 (0.000001) |
RS1042602 A/C | 11 | 88551344 | 0.90 | 0.6 | 0.9 | 80.0 (0.000001) |
RS1800498 C/T | 11 | 112796798 | 0.94 | 0.4 | 0.7 | 64.7 (0.000001) |
RS1079598 C/T | 11 | 112801484 | 0.86 | 0.7 | 0.8 | 8.7 (0.003) |
RS5443 C/T | 12 | 6825136 | 0.93 | 0.3 | 0.7 | 112.6 (0.000001) |
RS898271 A/GΨ | 13 | 90539922 | 0.81 | 0.5 | 0.7 | 25.2 (0.000001) |
RS1800404 A/G | 15 | 25909368 | 0.93 | 0.7 | 0.3 | 113.5 (0.000001) |
RS2891 A/G | 17 | 3652275 | 0.93 | 0.5 | 0.8 | 69.0 (0.000001) |