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Table 1 Region of 1q31-41 with summed heterozygosity score exceeding 50.

From: Markers typed in genome-wide analysis identify regions showing deviation from Hardy-Weinberg equilibrium

Marker or gene Position   Marker genotype counts
Observed
Expected
Heterozygosity scores for single, two and three marker analysis Gene description
    AA AB BB 1 2 3  
CAMSAP1L1 198975309 Start        calmodulin regulated spectrin-associated protein 1-like 1
CAMSAP1L1 199096455 End        
GPR25 199108789 Start        G protein-coupled receptor 25
GPR25 199109874 End        
C1orf106 199127292 Start        chromosome 1 open reading frame 106
rs2792810 199146603   1468 0 12 -6.1 -6.1 -0.9  
    1456.1 23.8 0.1     
rs3767424 199148779   1480 0 0 0 -0.1 13.4  
    1480 0 0     
C1orf106 199151486 End        
C1orf81 199151855 Start        chromosome 1 open reading frame 81
rs805909 199160517   1143 312 25 -0.1 13.4 3.9  
    1140.1 317.7 22.1     
rs1819043 199163659   345 940 195 26.4 9 8.8  
    448.8 732.4 298.8     
rs3767421 199163817   382 753 345 0.3 0.3 8.7  
    388.7 739.5 351.7     
rs805911 199172076   1463 17 0 0 24.7 8.8  
    1463 16.9 0     
rs705736 199173739   361 933 186 25.4 9 8.2  
    462.7 729.7 287.7     
C1orf81 199202415 End        
KIF21B 199205143 Start        kinesin family member 21B
rs7522991 199223808   383 754 343 0.3 0.2 8.3  
    390.3 739.5 350.3     
rs6696611 199225346   395 742 343 0.1 8 7.9  
    396.5 739.1 344.5     
rs705747 199236940   366 936 178 26.5 26 8.7  
    470 728.1 282     
rs697455 199243733   1468 12 0 0 0.3 0.3  
    1468 12 0     
rs3767406 199243903   383 754 343 0.3 0.3 0  
    390.3 739.5 350.3     
rs497824 199256967   1468 12 0 0 0 0  
    1468 12 0     
KIF21B 199259451 End        
  1. The table shows markers and genes in a region of 1q31-41 showing increased heterozygosity using a threshold for the summed heterozygosity scores (ignoring the highest-scoring marker) exceeeding 50. Observed counts are shown for each marker genotype with the expected counts in the row below. Heterozygosity scores, defined as -log(p) for increased heterozygosity and log(p) for increased homozygosity, are shown for individual markers and for two and three marker haplotypes.