Skip to main content

Table 6 Primer and probe sequences for custom made Sequenom SNP genotyping assay for NOD1

From: Nucleotide-binding oligomerization domain containing 1 (NOD1) haplotypes and single nucleotide polymorphisms modify susceptibility to inflammatory bowel diseases in a New Zealand caucasian population: a case-control study

Primer

SNP_ID

Probe Sequences

Forward primer

rs2075818

ACGTTGGATGCACTCACATCCGCAATACTC

 

rs2075822

ACGTTGGATGAAGGGGAGCAACAGGTGGGC

 

rs2907748

ACGTTGGATGAGGGTGGGCTCCTCTACAG

Reverse primer

rs2075818

ACGTTGGATGGGCAGGCACACACAATCTCC

 

rs2075822

ACGTTGGATGAAGGGCCATGGTCATGAGTC

 

rs2907748

ACGTTGGATGACAGAAGGTCAATGGGACTC

Extend primer

rs2075818

TAAGAATGACTACTTCTCGGC

 

rs2075822

GGGCATCGGGAATGGCA

 

rs2907748

GTGGGCTCCTCTACAGGTAGCT