Skip to main content

Table 2 Se at 50 generated links for the three artificial systems (E. COLI repressilator (A), MAPK cascade (B) and yeast glycolysis pathway (C)) and three yeast cell cycle microarray time-series datasets

From: Model selection in the reconstruction of regulatory networks from time-series data

Models

A

B

C

alpha

elu

cdc15

LODE

0.46

0.12

0.16

0.23

0.19

0.27

P1

0.32

0.19

0.20

0.35

0.42

0.27

P2

0.41

0.23

0.18

0.35

0.31

0.35

E1

0.47

0.25

0.16

0.38

0.31

0.23

E2

0.32

0.24

0.20

0.31

0.35

0.31

E3

0.60

0.27

0.17

0.15

0.27

0.08

I1

0.35

0.18

0.18

0.31

0.23

0.15

I2

0.32

0.24

0.21

0.27

0.35

0.27

I3

0.59

0.23

0.16

0.19

0.19

0.12

  1. For the artificial systems, the Se values were averaged over 100 runs of the simulation procedure. Model definitions (P1, P2, E1, E2, E3, I1, I2 and I3) are given in Table 1.
Back to article page

BMC Research Notes

ISSN: 1756-0500

Contact us