Skip to main content

Table 1 Whole pig genome microarray results.

From: 1Identification of genes differentially expressed in the embryonic pig cerebral cortex before and after appearance of gyration

Target Description Public ID Fold Expression Level
Calcium binding     
S100 calcium binding protein A1 (S100A1) [BX917468] 6,72 Brain 2-3
S100 calcium binding protein A14 (S100 A14) [CK451794] 5,81   NP
hippocalcin [BI341922] 3,40 Brain 1
calbindin 2 [BQ601075] 3,20 Brain 2
autotaxin [BX919892] 3,21 Brain 3
apolipoprotein E (APOE) [NM_214308.1] 3,12 Brain 3
secretory protein LOC348174 [CN069500] 3,00 Brain 4
Protocadherin 15 precursor [CO951943] -5,08 Brain 3
Cytoskeleton organization and biogenesis     
tubulin, alpha 1 (TUBA1) [CO954570] 6,33 Brain 3
nesprin (SYNE1) [CD572116] 5,42 Brain 4
actinin, alpha 2 (ACTN2) [CF795401] 4,30 Brain 4
Glial fibrillary acidic protein (GFAP) [BF712769] 4,13 Brain 1
Glial fibrillary acidic protein (GFAP) [BX671201] 3,94 Brain 1
Neurofilament heavy polypepteide 200 kDa [CF180627] 3,74 Brain 3
h1-calponin [NM_213878.1] 3,35 Brain 4
Transcription regulation     
Basic transcription element binding protein 1(BTEB1) [BG382637] 3,12 Brain 4
Homeobox protein Meis1 [CO941421] -3,18 Brain 4
Retinoic acid receptor RXR-gamma [CF181317] -3,20 Brain 4
Zinc finger protein IA-1(Insm1) [BQ603242] -3,82 Brain 2
KIT ligand (KITLG) [NM_214269.1] -3,92 Brain 3
Homeobox protein Meis1 [AW346968] -4,12 Brain 4
Zinc finger protein ZFPM2 [CN159819] -4,36 Brain 3
Transcription factor AP-2 gamma (AP2-gamma) [BG609515] -4,48 Brain 4
Jumonji domain containing protein 2C [BF712754] -6,68 Brain 4
Transcription factor AP-2 alpha (AP2-alpha) [AJ657914] -7,08 Brain 3
Signal transduction     
n-chimaerin [CD572334] 13,67 Brain 2
ADP-ribosyl cyclase 1 [BP159691] 4,84 Brain 3*
Troponin C, slow skeletal and cardiac muscles (TN-C) [BG382598] 3,64 Brain 4
histamine receptor H1 [BF710024] 3,28 Brain 4
Lipid phosphate phosphohydrolase 1 (PAP2-alpha) [CF796129] 3,22 Brain 4
Frizzled 1 precursor (Frizzled-1) [AJ682600] -3,23 ?  
proenkephalin [BI181438] -3,36 Brain 3
TGF-beta receptor type I precursor [AF317296.1] -3,57 Brain 4
Retinoic acid-binding protein II, cellular (CRABP-II) [CN160216] -3,67 Brain 4
Central nervous system development     
neurogranin [BX675498] 4,91 Brain 2
proteolipid protein 1 (PLP) [BQ601157] 4,87 Brain 2
proteolipid protein 1 (PLP) [BQ601666] 4,09 Brain 2
Myelin basic protein (MBP) [NM_001001546.1] 4,08 Brain 3
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 [BF188991] 4,07 Brain 4
Enhancer-of-split and hairy-related protein 2 (SHARP-2) [CO993157] 3,18 Brain 4
Slit homolog 2 protein precursor (Slit-2) [BF712064] 3,06 Brain 4
protocadherin 18 (PCDH18) [CF368788] -3,21 Brain 3
Other genes     
ribonuclease, RNase A family, 1 [BG894750] 11,44 ?  
armadillo repeat containing, X-linked 1 (ARMCX1) [CK464699] 10,15 Brain 4
parkin isoform 1; parkin [CO994470] 9,12 Brain 4
major facilitator superfamily domain containing 4 [BE012554] 7,09 Brain 3
collagen, type XXI, alpha 1 (COL21A1) [BF440682] 7,08 Brain 3
Protein C20orf103 precursor [CF180509] 6,72 Brain 2
Sus scrofa arachidonate 12-lipoxygenase (ALOX15) [NM_213931.1] 6,05 Brain 4
phosphorylase, glycogen [CF365721] 5,90 Brain 4*
muscle glycogen phosphorylase [CF179951] 5,75 Brain 4*
coagulation factor V [NM_214120.1] 4,57 Brain 4
Atrophin-1 interacting protein 1 [CO949606] 4,51 Brain 1
prominin 1 [CN163054] 4,41 Brain 3
dendrin (DDN) [CF179783] 4,26 Brain 2-3
CUB and sushi multiple domains protein 2 [BI183640] 4,21 Brain 4
Pleckstrin and Sec7 domain containing protein 3 (Cytohesin) [CN157336] 4,05 Brain 4
Probable serine protease HTRA4 precursor [CK450639] 3,78 Brain 4*
Ras associated [BI181239] 3,73 ?  
Membrane protein MLC1 [CF368389] 3,53 Brain 2
Tetratricopeptide repeat protein 7B [BQ600843] 3,43 Brain 3
T cell receptor [AB079532.1] 3,43 ?  
Aquaporin 1(AQP-1) [CF792401] 3,40 Brain 3
Claudin-1 [BF188991] 3,38 Brain 4
Membrane protein MLC1 [AW478160] 3,34 Brain 2-3
Potential carboxypeptidase-like protein X2 precursor [BQ604567] 3,30 Brain 4
retinaldehyde binding protein 1 [BX917253] 3,28 Brain 4
fibronectin type III domain containing 1(FSD1) [CF366197] 3,26 Brain 1-2
syntaxin binding protein 5 (tomosyn) [AJ666521] 3,25 Brain 4
hypothetical protein FLJ21127 [CN070291] 3,14 Brain 4
T-cell receptor beta chain C region [AB079530.1] 3,05 ?  
Zinc transporter 3 (ZnT-3) [BI346660] 3,03 Brain 3
NYD-SP14 protein [BI404541] 3,01 Brain 4
Collagen alpha 3(IV) chain precursor [BX918155] 3,00 Brain 4
KIAA1333 [BF703163] -3,00 Brain 4
Huntingtin-interacting protein 14 [BQ603863] -3,02 Brain 4
vitelline membrane outer layer 1 homolog [CF368035] -3,03 ?  
Epithelial V-like antigen 1 precursor [CF787898] -3,12 ?  
Similar to insulin-like growth factor binding protein [BQ599569] -3,17 Brain 4
Probable RNA-dependent helicase p72 (DEAD-box protein 17) [CF360658] -3,21 Brain 4
Decorin precursor (Bone proteoglycan II) (PG-S2) [BI182181] -3,23 ?  
Epoxide hydrolase 1 (Microsomal epoxide hydrolase) [CF364362] -3,31 Brain 3
metallophosphoesterase 1 (MPPE1) [CO954514] -3,39 Brain 3-4
NSE1 [AJ659310] -3,46 Brain 3
NSE1 [AJ657499] -3,52 Brain 3
serine/threonine protein kinase TAO1 homolog; STE20-like kinase [BX676366] -3,63 Brain 4
dopamine receptor D2 [BF712306] -3,68 Brain 4
Collagen alpha 1(I) chain precursor [AF201723.1] -3,84 ?  
Endothelial lipase precursor (EDL) [BX915625] -7,23   NP
Probable RNA-dependent helicase p72 (DEAD-box protein 17) [BX668358] -7,37 Brain 4
Probable RNA-dependent helicase p72 (DEAD-box protein 17) [CO991338] -10,71 Brain 4
  1. Result of microarray analysis of differentially expressed genes with annotation in E60 and E80 cortex.