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Table 1 Example distance matrix table.

From: ANDES: Statistical tools for the ANalyses of DEep Sequencing

  1-Jun-08 16-Jun-08 16-Nov-08 1-Dec-08 16-Dec-08
1-Jun-08 0.00000 0.01297 0.03203 0.03184 0.02221
16-Jun-08 0.01297 0.00000 0.02209 0.02191 0.01220
16-Nov-08 0.03203 0.02209 0.00000 0.00247 0.01054
1-Dec-08 0.03184 0.02191 0.00247 0.00000 0.01043
16-Dec-08 0.02221 0.01220 0.01054 0.01043 0.00000
  1. This table represents a subset of the RMSD-based distances that were calculated between partitions of human influenza H1N1 collection dates. Each value is the average positional RMSD along the lengths of the 2 compared HA segments. The complete RMSD distance matrix was then used as input into R to compute a dendrogram as seen in Figure 7.