Table 1 List of primer sequences used and/or developed in this study for PCR and sequencing. Standard IUB codes are used for degenerate primers.
Primer Name | Sequence (5'-3') | reference |
|---|---|---|
326 | GAGTGYCAYTAYYTNAAYGGYAC | Ekblom et al. (2003) |
325 | GTAGTTGTGNCKGCAGTANSTGTCCAC | Ekblom et al. (2003) |
MHC05 | CGTRCTGGTGGCACTGGTGGYGCT | Miller and Lambert (2004) |
RapEx3CR | CAGGCTGRCGTGCTCCAC | Alcaide et al. (2007) |
MHC-F1 | GAGTGTYVCTTCATTAACGGCAC | Anmarkrud et al. 2010 |
MHC-R1 | CKCGTAGTTGTGCCGGCA | Anmarkrud et al. 2010 |
MHCIIFihy-I1F | CCTGYACAAACAGRGKTKTTCC | This study |
MHCIIFihy-I2R | GCTCTGCCCCACGCTCAC | This study |
MHCIIFihy-pE2R | ACCTCACCTTCTCCGTGC | This study |
MHCIIFihy-pE2F | AAYGGCACGGAGAAGGTG | This study |
MHCIIFihy-lwE2F | CATTAAYGGCACCAGCCGG | This study |
MHCIIFihy-psE2R | TCCTCTCCACCAACCTCACGCA | This study |
MHCIIFihy-E2CF | CCGTGTCCTGCACACACAGC | This study |
MHCIIFihy-E2CR | GGGACASGCTCTGCCCCG | This study |
MHCIIPas-E2iF | GAGTGTYACTTCATTAACGGCAC | This study |
MHCIIPas-E2iR | CYNGTAGTTGTGNCGGCAG | This study |