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Table 2 Effects of the c.-312A>G SNP genotypes on BMS, BFT, CWT, REA and RT in the 3 populations

From: Replicated association of the single nucleotide polymorphism in EDG1 with marbling in three general populations of Japanese Black beef cattle

    Genotype§
Trait* Population P -value GG AG AA
BMS Kagoshima 0.0786 0.42 ± 0.05 0.28 ± 0.04 0.37 ± 0.07
  Miyazaki 0.0377 0.43 ± 0.13a 0.36 ± 0.09a -0.07 ± 0.17b
  Nagasaki 0.0012 0.52 ± 0.18a 0.01 ± 0.11b -0.32 ± 0.13b
SFT Kagoshima 0.1256 -0.59 ± 0.22 -0.89 ± 0.18 -1.36 ± 0.31
  Miyazaki 0.0619 0.88 ± 0.26 0.45 ± 0.18 -0.14 ± 0.34
  Nagasaki 0.7401 0.05 ± 0.45 0.25 ± 0.27 -0.07 ± 0.32
CWT Kagoshima 0.1927 8.83 ± 1.60 6.62 ± 1.32 3.83 ± 2.28
  Miyazaki 0.1811 -0.19 ± 0.50 0.25 ± 0.35 -1.12 ± 0.66
  Nagasaki 0.0014 16.30 ± 3.69a 5.78 ± 2.19a -0.49 ± 2.65b
REA Kagoshima 0.0029 1.26 ± 0.23a 0.45 ± 0.19b -0.02 ± 0.34b
  Miyazaki 0.2642 0.71 ± 0.26 0.48 ± 0.18 0.00 ± 0.35
  Nagasaki 0.0960 0.13 ± 0.30 -0.48 ± 0.18 -0.67 ± 0.22
RT Kagoshima 0.2868 1.14 ± 0.20 0.73 ± 0.16 0.92 ± 0.28
  Miyazaki 0.4833 -0.12 ± 0.42 0.45 ± 0.29 -0.12 ± 0.55
  Nagasaki 0.0002 3.30 ± 0.96a 1.50 ± 0.57b -1.32 ± 0.69b
  1. *BMS, Beef marbling score; SFT, Subcutaneous fat thickness (mm); CWT, Carcass weight (kg); REA, Rib eye area (cm2); RT, Rib thickness (mm).
  2. §The breeding values are shown as estimates ± SE.
  3. a, bEstimates at different genotypes without a common letter in their superscripts significantly differ (P < 0.05).