Table 1 Type-I error rate using 
test with unknown haplotypes
test with unknown haplotypesFrom: A Monte Carlo test of linkage disequilibrium for single nucleotide polymorphisms
HWE | HWD | |||
|---|---|---|---|---|
Level | Type-I error | Inflation factor | Type-I error | Inflation factor |
0.05 | 0.2859 | 5.72 | 0.3116 | 6.23 |
0.01 | 0.2252 | 22.52 | 0.2458 | 24.58 |
0.001 | 0.1662 | 166.2 | 0.1923 | 192.3 |