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Table 2 Genome coverage analysis for different Phred quality values

From: Analysis of quality raw data of second generation sequencers with Quality Assessment Software

 

Cp162

B7(F3)

B7(R3)

Quality Filter

QV 20

QV23

QV25

QV20

QV23

QV25

QV20

QV23

QV25

Mean

172×

104×

52×

207×

134×

76×

265×

217×

172×

Median

199×

152×

116×

235×

182×

142×

281×

248×

220×

  1. Genomic sequencing coverage of Cp162 and B7 (tag F3 and R3) for different Phred quality value cutoffs based on the mean and median.
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BMC Research Notes

ISSN: 1756-0500

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