Figure 3
From: An efficient algorithm for systematic analysis of nucleotide strings suitable for siRNA design
Generation of the storage of all substrings. This example illustrates the steps of Algorithm 1 for the input consisting of 3 genes AGAGAGGC, TCAATCCC and AATAAATC. All of the corresponding n-strings are identified with the number of occurrences stored in the leaf. The list of unique n-strings is provided, and the "siRNA seats" resulting from this computation are specified.