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Table 5 Comparison of ARACNE, TINGe and C-ARACNE using synthetic networks.

From: Parallel mutual information estimation for inferring gene regulatory networks on GPUs

   Time (Sec.) Specificity Sensitivity Precision TP TN FP FN
m = 500 ARACNE 188.28 0.995 0.255 0.373 98 30575 165 287
  TINGe 3.74 0.995 0.257 0.404 99 30594 146 286
  C-ARACNE 1.07 0.996 0.291 0.448 112 30602 138 273
m = 900 ARACNE 637.56 0.994 0.27 0.378 104 30569 171 281
  TINGe 3.9 0.995 0.265 0.394 102 30583 157 283
  C-ARACNE 1.3 0.996 0.294 0.454 113 30604 136 272
m = 1200 ARACNE 1312.3 0.995 0.283 0.394 109 30572 168 276
  TINGe 4.86 0.995 0.273 0.4 105 30581 159 280
  C-ARACNE 1.46 0.995 0.296 0.44 114 30595 145 271