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Table 2 List of genes commonly down regulated by Cyclin T2 or Cyclin T1 depletion

From: Limited redundancy in genes regulated by Cyclin T2 and Cyclin T1

Gene name

Gene ID

Gene identifier

Probe ID

Chromosome

Fold-change

p-value

     

Cyclin T2 depletion

Cyclin T1 depletion

 

Aldo-keto reductase family 1, member C2

AKR1C2

U05598

209699_x_at

10

-2.84

-2.23

0.0153

Bone morphogenetic protein 2

BMP2

AA583044

205289_at

20

-2.46

-2.18

0.0239

Forkhead box Q1

FOXQ1

AI676059

227475_at

6

-1.98

-2.18

0.0415

Caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)

CASP1

U13699

211367_s_at

11

-1.95

-1.85

0.048914

Dual specificity phosphatase 16

DUSP16

AB051487

224832_at

12

-1.94

-1.32

0.0407

Pre-B-cell leukemia transcription factor interacting protein 1

PBXIP1

AI935162

214177_s_at

1

-1.90

-2.08

0.0185

Bromodomain containing 9

BRD9

NM_024786

1552283_s_at

5

-1.82

-1.7

0.007266

Transcription factor 7-like 1 (T-cell specific, HMG-box)

TCF7L1

NM_031283

221016_s_at

2

-1.81

-1.8

0.010119

Peroxidasin homolog (Drosophila)

PXDN

D86983

212013_at

2

-1.76

-1.83

0.0127

1-acylglycerol-3-phosphate O-acyltransferase 3

AGPAT3

BC004219

223184_s_at

21

-1.61

-1.79

0.01225

  1. Genes commonly down regulated when either Cyclin T2 or Cyclin T1 is depleted. The 10 genes with greatest decrease in expression following Cyclin T2 or Cyclin T1 depletion are listed (p ≤ 0.05). All fold-changes are relative to MM control. Minimum expression level of genes in MM control was arbitrarily chosen as 3.0.