Skip to main content
Figure 1 | BMC Research Notes

Figure 1

From: MLVA polymorphism of Salmonella enterica subspecies isolated from humans, animals, and food in Cambodia

Figure 1

Validation of marker and a new allele by sequencing of the PCR fragment. Figure 1A: S. enterica Sandiego (SA_01_06A) sequence obtained using STTR8 marker. The sequences between brackets are TR sequences. The inserted sequence is underlined. Position of the fragment was obtained by comparison of the sequence with the S.enterica Typhimurium LT2 reference strain using BLAST program in ncbi. Figure 1B: A new allele; S.enterica Paratyphi B consensus sequence of the n° 202 (SA_03_01B) isolate obtained using the STTR5 marker. The TR motif is ACCACG. The underlined sequences are flanking sequences of the repeat motif, colored in red and grey alternatively. The sequence is composed of 13 TR. Flanking sequences are underlying. The comparison of sequences between S.enterica Paratyphi B n° 202 (SA_03_01B) isolate and S. enterica Typhimurium LT2 (259_15U_6bp) reference strain.

Back to article page