From: diArk 2.0 provides detailed analyses of the ever increasing eukaryotic genome sequencing data
diArk | GOLD | NHGRI | NCBI Genome | ISC | |
---|---|---|---|---|---|
# species (unique/total) | 806 | 1876/2153 | 187/248 | 986/1090 | 287/360 |
# mRNA sequencing projects | 562 | 350 (EST) 88 (Transcriptome) | 11 (RNA) 1 (cDNA) | - | 6 (cDNA) 1 (EST) |
# genome sequencing projects | 1499 | 1705 | 160 | 1078 | - |
# genomes marked as "sequenced" 1) | 613 | 358 (completed) | 88 (completed) | 431 | 105 |
# genomes marked as "published" 2) | 358 | 156 | - | 285 | - |
taxonomy | full taxonomy | two major taxa | one major taxon | two major taxa | one major taxon |
sequencing method | ✓ | - | - | - | - |
assembly method | ✓ | - | - | - | - |
GC-content (# species) | 589/613 | 142/1876 | - | - | - |
genome size (# species) | 589/613 | 510/1876 | - | ✓ | - |
assembly details | ✓ | - | - | - | - |
genome assembly files analysed | 2109 | - | - | - | - |
species common names | ✓ | ✓ | ✓ | - | ✓ |
links to species pages | ✓ | ✓ | - | - | - |
detailed info about species pages | ✓ | - | - | - | - |
sequencing centre reference | ✓ | ✓ | ✓ | ✓ | ✓ |
funding agency | - | ✓ | ✓ | - | ✓ |
target (survey sequencing, draft, etc.) | - | - | ✓ | ✓ | ✓ |
project status | - | ✓ | ✓ | ✓ | ✓ |
database search options | ✓ | ✓ | - | limited | limited |
database content view options | 7 result tabs | 1 table | 1 table | 1 table | 1 table |
accessibility/speed | fast | slow | fast | fast | fast |