From: Selection of reference genes for qPCR in hairy root cultures of peanut
Target gene | Efficiencya | SE (E)b | Slopec | r2 d | NTCe | Reference gene ratingf |
---|---|---|---|---|---|---|
TUA3 | 116.3 | 0.037 | -2.985 | 0.911 | N/A | Poor |
ACT7 | 99.1 | 0.012 | -3.344 | 0.979 | N/A | Excellent |
TIP41 | 93.2 | 0.007 | -3.497 | 0.991 | N/A | Good |
SAND | 128.4 | 0.040 | -2.787 | 9.190 | N/A | Poor |
H3 | 99.8 | 0.009 | -3.328 | 0.987 | N/A | Excellent |
TBP2 | 107.2 | 0.026 | -3.161 | 0.919 | N/A | Good |
RPB1 | 414.8 | 1.261 | -1.405 | 0.218 | N/A | Poor |
EFα1 | 102.3 | 0.008 | -3.268 | 0.991 | N/A | Excellent |
RPL8C | 95.2 | 0.008 | -3.442 | 0.990 | N/A | Excellent |
EIF4A1 | 107.0 | 0.017 | -3.166 | 0.970 | N/A | Excellent |
CYP1 | 92.4 | 0.006 | -3.519 | 0.993 | N/A | Excellent |
GAPDH | 124.2 | 0.030 | -2.852 | 0.925 | N/A | To be considered |
APT1 | 155.7 | 0.072 | -2.453 | 0.884 | N/A | Poor |
UBQ11 | 114.9 | 0.018 | -3.010 | 0.967 | 31.08 | Poor (dimer) |
AP47 | 86.8 | 0.008 | -3.686 | 0.986 | N/A | Poor |
AT4G33380 | 83.5 | 0.028 | -3.795 | 0.859 | N/A | Poor |
PP2AA3 | 120.7 | 0.051 | -2.908 | 0.797 | N/A | Poor |
HEL | 101.2 | 0.011 | -3.293 | 0.983 | N/A | Excellent |
AT1G31300 | 99.9 | 0.008 | -3.324 | 0.991 | N/A | Excellent |
rolC | 105.2 | 0.012 | -3.203 | 0.983 | N/A | Good |
aux1 | 602.4 | 0.568 | -1.181 | 0.771 | 33.79 | Poor |