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Table 1 Summary of sparganum transcriptome

From: SpiroESTdb: a transcriptome database and online tool for sparganum expressed sequences tags

 

Numbers

Total sequence reads

5,760

Total analyzed reads

5,655

Total assembled sequences (average size)

1,787 (725 bp)

   Contigs

910 (787 bp)

   Singlets

877 (661 bp)

Total annotated genes (non-redundant set)*

1,262

  1. *Homologies search was performed by BLASTN, BLASTX, TBLASTX, Uniprot, KEGG and InterProScan