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Table 4 Percentage of loci in each pair of populations in which the null hypothesis that genotypes are drawn from the same distribution in all populations has been accepted ( p> 0.05) along with the corresponding average p-values, as a measure of population differentiation

From: Analysis of genetic diversity in Brown Swiss, Jersey and Holstein populations using genome-wide single nucleotide polymorphism markers

Chromosome BS vs. JE p-value JE vs. HO p-value BS vs. HO p-value
1 7.217 0.338 8.191 0.080 4.903 0.369
2 7.577 0.309 6.980 0.099 5.151 0.398
3 7.642 0.365 7.886 0.108 4.472 0.377
4 7.206 0.331 17.085 0.143 4.575 0.363
5 8.140 0.346 6.436 0.163 5.395 0.371
6 6.962 0.357 6.157 0.188 4.185 0.361
7 8.238 0.336 6.819 0.205 3.982 0.308
8 7.016 0.357 7.579 0.225 5.154 0.363
9 8.903 0.374 7.243 0.254 5.483 0.371
10 8.089 0.346 7.366 0.287 4.959 0.315
11 6.654 0.386 6.932 0.321 5.129 0.355
12 7.447 0.383 7.027 0.351 5.646 0.335
13 6.465 0.361 6.814 0.383 4.368 0.353
14 7.575 0.370 7.046 0.415 3.934 0.311
15 7.055 0.404 8.282 0.446 4.663 0.361
16 8.110 0.388 7.798 0.486 4.554 0.404
17 7.349 0.392 7.677 0.521 5.249 0.357
18 6.897 0.365 6.191 0.556 4.232 0.392
19 5.963 0.419 7.645 0.596 5.122 0.365
20 7.120 0.408 6.989 0.627 4.311 0.333
21 7.122 0.306 8.160 0.665 5.935 0.386
22 7.027 0.342 7.512 0.682 5.654 0.418
23 6.995 0.381 8.768 0.710 4.729 0.334
24 6.818 0.381 8.198 0.748 3.247 0.453
25 7.229 0.374 7.886 0.781 3.614 0.270
26 8.072 0.336 8.547 0.818 3.799 0.412
27 8.974 0.364 7.799 0.854 4.167 0.426
28 9.330 0.355 8.342 0.895 4.281 0.324
29 7.234 0.427 7.722 0.901 5.279 0.333
Average 7.463 0.365 7.830 0.466 4.696 0.363