Allele discovery of ten candidate drought-response genes in Austrian oak using a systematically informatics approach based on 454 amplicon sequencing

Table 3 Polymorphisms detected

Gene	S	N_a	N_e	H_o	H_e	F_n	HWE	Mutations/100 bp
ARF16	10	10	1.667	0.249	0.404	0.134	0.000	2.75
BMY7	19	52	6.656	0.481	0.851	0.189	0.030	5.97
ERD8	26	27	2.602	0.551	0.619	0.112	0.000	7.24
LEA14	34	49	5.079	0.640	0.803	0.095	0.000	12.23
LTP	34	13	2.849	0.260	0.648	0.228	0.000	13.71
PER64	7	10	1.817	0.209	0.444	0.182	0.000	3.37
PIP1E	15	12	1.638	0.274	0.391	0.111	0.000	4.79
RD26	13	10	1.253	0.115	0.202	0.115	0.000	3.61
Average	19.75	22.88	2.945	0.347	0.545	0.146	0.004	6.71
Total	158	183	23.561

S Number of polymorphic sites, N_a number of alleles, N_e effective number of alleles, H_o observed heterozygosity, H_e expected heterozygosity, F_n frequency of null alleles, HWE test for deviation from Hardy-Weinberg equilibrium (p-value)

ISSN: 1756-0500