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Table 4 Summary data of candidate genes

From: Allele discovery of ten candidate drought-response genes in Austrian oak using a systematically informatics approach based on 454 amplicon sequencing

Gene

Annotation

Accession

Primer pairs

Ta(°C)

Length

ARF16

Auxin responsive factor 16

FP033974

Fw: 5′-M13Fw-CAGTTGATGTTGGTTGGACA-3′

55

363

 

Re: 5′-M13Re-ACAATAAACAAATGCTACTCA-3′

  

BMY7

Beta-amylase 1

FP061723

Fw: 5′-M13Fw-TGCATTGCCTCGTTATGATG-3′

59

318

 

Re: 5′-M13Re-TGAAACCATGGGTGAAACCT-3′

  

DHN2

Dehydrin 2

FP045825

Fw: 5′-M13Fw-AGCAGCAGCAAGGTC-3′

62

309

 

Re: 5′-M13Re-CCTTGATCTTCTCCATCACTCC-3′

  

ERD8

Heat shock cognate protein 80

FP041070

Fw: 5′-M13Fw-AGAATGACAAATCAGTGAAGGA-3′

59

359

 

Re: 5′-M13Re-CGCATCAAAGCAATAGCAAA-3′

  

GLP3A

Germin-like protein 3A

FP024682

Fw: 5′-M13Fw-GGAGACCTGGGCTTGAACTA-3′

59

344

 

Re: 5′-M13Re-TGTCAATGGCCTTGGAATTT-3′

  

LEA14

Desiccation protectant protein Lea14

FP049285

Fw: 5′-M13Fw-TGTGCAGATGGGGACATAGA-3′

57

278

 

Re: 5′-M13Re-TGCAACAAAAATTGAAGATAGGAA-3′

  

LTP

Prolin-rich protein

FP031479

Fw: 5′-M13Fw-GCTTCTTAGTGCTTGCCAAAA-3′

60

248

 

Re: 5′-M13Re-TCAGATTTCAGCCCATCTGAG-3′

  

PER64

Peroxidase 64

FP051623

Fw: 5′-M13Fw-CAACCACCACAGCATTTGAC-3′

62

208

 

Re: 5′-M13Re-CCTAATCTCTTGCCCACCAG-3′

  

PIP1E

Aquaporin PIP1-2

FP040796

Fw: 5′-M13Fw-CTGTGGTAAAGGGCTTCCAA-3′

58

313

 

Re: 5′-M13Re-ACACTGCAAACCCAATAGGC-3′

  

RD26

Responsive to desiccation 26

FN712698

Fw: 5′-M13Fw-AATTATTGGTGACATTGATTTG-3′

  
 

Re: 5′-M13Re-GGGGCTTTTCCAATATAGAAT-3′

54

360

  1. Accession GeneBank accession number, Ta annealing temperature of gene specific primers