Population | # Individuals | # LRLD-SNP pairs | # Affected SNPs | # LDGIs | # Affected genes |
---|---|---|---|---|---|
PLINK (P< 0.01) | Â | Â | Â | Â | Â |
Phase II | Â | Â | Â | Â | Â |
 CEU | 30 | 66343 | 44756 | 23425 | 14444 |
Phase III | Â | Â | Â | Â | Â |
 CEU cluster 1 | 27 | 34940 | 28817 | 18569 | 11644 |
 CEU cluster 2 | 40 | 30353 | 28082 | 15333 | 11308 |
 CHD cluster 1 | 22 | 44513 | 29109 | 24675 | 11934 |
 CHD cluster 2 | 31 | 30981 | 27563 | 15425 | 11161 |
 JPT + CHB cluster 1 | 28 | 34672 | 28024 | 18212 | 11401 |
 JPT + CHB cluster 2 | 22 | 48626 | 29360 | 29751 | 12014 |
 LWK | 23 | 42305 | 23398 | 35808 | 10545 |
 MKK cluster 1 | 28 | 28924 | 22740 | 21185 | 10056 |
 MKK cluster 2 | 24 | 54795 | 25086 | 47884 | 11203 |
 MKK cluster 3 | 21 | 98150 | 27043 | 89007 | 11952 |
 MKK cluster 4 | 22 | 63718 | 25598 | 53623 | 11465 |
 YRI cluster 1 | 29 | 19116 | 20874 | 13011 | 9246 |
 YRI cluster 2 | 28 | 22127 | 21138 | 16279 | 9390 |
PLINK ( P < 0.001) | Â | Â | Â | Â | Â |
Phase II | Â | Â | Â | Â | Â |
 CEU | 48 | 61699 | 43945 | 21112 | 14181 |
 JPT + CHB | 20 | 117251 | 44754 | 61435 | 14792 |
 YRI cluster 1 | 22 | 86494 | 38786 | 65698 | 13775 |
 YRI cluster 2 | 21 | 98239 | 39389 | 75825 | 13950 |
Phase III | Â | Â | Â | Â | Â |
 ASW | 25 | 18880 | 21631 | 11922 | 9432 |
 CEU cluster 1 | 62 | 29924 | 27834 | 14997 | 11208 |
 CEU cluster 2 | 41 | 30586 | 27967 | 15302 | 11269 |
 CHD cluster 1 | 33 | 31456 | 27684 | 15283 | 11224 |
 CHD cluster 2 | 21 | 31931 | 27598 | 15821 | 11215 |
 CHI cluster 1 | 23 | 48723 | 30147 | 29355 | 12304 |
 CHI cluster 2 | 21 | 56926 | 30705 | 37185 | 12543 |
 JPT+CHB cluster 1 | 28 | 34509 | 28021 | 19004 | 11404 |
 JPT+CHB cluster 2 | 30 | 33894 | 28111 | 17153 | 11424 |
 JPT+CHB cluster 3 | 27 | 36917 | 28193 | 19958 | 11495 |
 JPT+CHB cluster 4 | 23 | 44475 | 29077 | 25505 | 11928 |
 JPT+CHB cluster 5 | 61 | 32011 | 27861 | 15491 | 11229 |
 LWK cluster 1 | 21 | 61580 | 24684 | 54472 | 11194 |
 LWK cluster 2 | 33 | 15850 | 19800 | 10436 | 8729 |
 MEX | 25 | 36330 | 29249 | 22032 | 11998 |
 MKK cluster 1 | 41 | 17272 | 20819 | 10688 | 8997 |
 MKK cluster 2 | 26 | 30057 | 22480 | 24739 | 10124 |
 MKK cluster 3 | 25 | 52057 | 25081 | 44570 | 11104 |
 MKK cluster 4 | 27 | 36459 | 23314 | 28450 | 10368 |
 MKK cluster 5 | 24 | 41993 | 24359 | 33284 | 10779 |
 TSI cluster 1 | 32 | 31021 | 28490 | 16191 | 11517 |
 TSI cluster 2 | 30 | 32289 | 28501 | 16722 | 11535 |
 YRI cluster 1 | 31 | 18261 | 20636 | 12029 | 9185 |
 YRI cluster 2 | 37 | 15825 | 19577 | 9889 | 8602 |
 YRI cluster 3 | 22 | 45628 | 23996 | 39632 | 10846 |
Sum | Â | 801340 | 94876 | 646203 | 21240 |