Table 2 The Alignment Results By Using the EBI database (BLAST Similarity Search) on seven Virus Genomes
From: Arapan-S: a fast and highly accurate whole-genome assembly software for viruses and small genomes
Species | Total length (bp) | Genome length (EBI) | Alignment score | Identities | Expect value E() |
|---|---|---|---|---|---|
Bovine Respiratory Coronavirus AH187 | 30936 | 30969 | 30875 | 99.803% | 0.0 |
Calf-giraffe Coronavirus US/OH3/2006 | 30831 | 30979 | 30762 | 99.776% | 0.0 |
Waterbuck Coronavirus US/OH-WD358-TC/1994 | 30995 | 30995 | 30934 | 99.803% | 0.0 |
White-tailed Deer Coronavirus US/OH-WD470/1994 | 31018 | 31020 | 30957 | 99.803% | 0.0 |
Influenza A virus (A/Memphis/1/71(H3N2)) | 12598 | 13397 | 12503 | 99.246% | 0.0 |
Influenza A Virus (A/Swine/colorado/1/77/(H3N2)) | 13019 | 13304 | 12969 | 99.616% | 0.0 |
Influenza A Virus (A/Weiss/43/(H1N1)) | 13300 | 13371 | 13208 | 99.308% | 0.0 |