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Table 2 Human breast cancer and extrogen recptor RT2 profiler PCR array

From: Differential expression of breast cancer-associated genes between stage- and age-matched tumor specimens from African- and Caucasian-American Women diagnosed with breast cancer

Description Accession #:
Genes Associated with Breast Cancer Prognosis  
Androgen receptor (AR) NM_000044
Antigen identified by monoclonal antibody Ki-67 (MKI67) NM_002417
B-cell CLL/lymphoma 2 (BCL2) NM_000633
BCL2-associated agonist of cell death (BAD) NM_004322
BCL2-associated athanogene (BAG1) NM_004323
Cadherin 1, type 1, E-cadherin (CDH1) NM_004360
Catenin (cadherin-associated protein), beta 1, (CTNNB1) NM_001904
Cathepsin B (CTSB) NM_001908
Clusterin (CLU) NM_001831
Collagen, type VI, alpha 1 (COL6A1) NM_001848
Cyclin A1 (CCNA1) NM_003914
Cyclin A2 (CCNA2) NM_001237
Cyclin D1 (CCND1) NM_053056
Cyclin E1 (CCNE1) NM_001238
Cyclin-dependent kinase inhibitor 1A (CDKN1A) NM_000389
Cyclin-dependent kinase inhibitor 1B (CDKN1B) NM_004064
Cyclin-dependent kinase inhibitor 2A (CDKN2A) NM_000077
Epidermal growth factor receptor (EGFR) NM_005228
Estrogen receptor 1 (ESR1) NM_000125
Estrogen receptor 2 (ESR2) NM_001437
Fas ligand (TNF superfamily, member 6) (FASLG) NM_000639
FOS-like antigen 1 (FOSL1) NM_005438
GATA binding protein 3 (GATA3) NM_002051
Gelsolin (GSN) NM_000177
Inhibitor of DNA binding 2 (ID2) NM_002166
Insulin-like growth factor binding protein 2 (IGFBP2) NM_000597
Integrin, alpha 6 (ITGA6) NM_000210
Integrin, beta 4 (ITGB4) NM_000213
Interleukin 2 receptor, alpha (IL2RA) NM_000417
Interleukin 6 (IL6) NM_000600
Interleukin 6 receptor (IL6R) NM_000565
Interleukin 6 signal transducer (IL6ST) NM_002184
Jun oncogene (JUN) NM_002228
Kallikrein-related peptidase 5 (KLK5) NM_012427
Keratin 19 (KRT19) NM_002276
Kruppel-like factor 5 (KLF5) NM_001730
Mitogen-activated protein kinase kinase 7 (MAP2K7) NM_145185
Mucin 1, cell surface associated (MUC1) NM_001018016
Nerve growth factor (NGF) NM_002506
Nerve growth factor receptor (NGFR) NM_002507
Prostaglandin-endoperoxide synthase 2 (PTGS2) NM_000963
TNF receptor superfamily, member 6 (FAS) NM_000043
V-erb-b2 erythroblastic leukemia viral oncogene homolog 2 (ERBB2) NM_004448
Genes Associated with Estrogen Receptor Signaling  
Non-metastatic cells 1 (NME1) NM_000269
Phosphatase and tensin homolog (PTEN) NM_000314
Plasminogen activator, urokinase (PLAU) NM_002658
Progesterone receptor (PGR) NM_000926
Serpin peptidase inhibitor, clade B, member 5 (SERPINB5) NM_002639
Serpin peptidase inhibitor, clade E, member 1 (SERPINE1) NM_000602
Thrombospondin 1 (THBS1) NM_003246
Topoisomerase (DNA) II alpha (TOP2A) NM_001067
Transforming growth factor, alpha (TGFA) NM_003236
Tumor protein p53 (TP53) NM_000546
Tyrosine kinase with immunoglobulin-like and EGF-like domains 1 (TIE1) NM_005424
Vascular endothelial growth factor A (VEGFA) NM_003376
Genes Associated with Response to Chemotherapy  
Cathepsin D (CTSD) NM_001909
Complement component 3 (C3) NM_000064
Heat shock 27 kDa protein 1 (HSPB1) NM_001540
Keratin 18 (KRT18) NM_000224
Serpin peptidase inhibitor, member 3 (SERPINA3) NM_001085
Solute carrier family 7, member 5 (SLC7A5) NM_003486
Stanniocalcin 2 (STC2) NM_003714
Trefoil factor 1 (TFF1) NM_003225
Genes Associated with Breast Cancer Diagnosis and Progression  
BCL2-like 2 (BCL2L2) NM_004050
CD44 molecule (CD44) NM_000610
Claudin 7 (CLDN7) NM_001307
Cytochrome P450, family 19, subfamily A, polypeptide (CYP19A1) NM_000103
Deleted in liver cancer 1 (DLC1) NM_006094
Fibroblast growth factor 1 (FGF1) NM_000800
Fibronectin leucine rich transmembrane protein 1 (FLRT1) NM_013280
Gamma-aminobutyric acid (GABA) A receptor, pi (GABRP) NM_014211
GNAS complex locus (GNAS) NM_080425
High-mobility group box 1 (HMGB1) NM_002128
Metallothionein 3 (MT3) NM_005954
Nuclear transcription factor Y, beta (NFYB) NM_006166
Pregnancy-associated plasma protein A, pappalysin 1 (PAPPA) NM_002581
Ras-related C3 botulinum toxin substrate 2 (RAC2) NM_002872
Ribosomal protein L27 (RPL27) NM_000988
Secretoglobin, family 1D, member 2 (SCGB1D2) NM_006551
Secretoglobin, family 2A, member 1 (SCGB2A1) NM_002407
Small proline-rich protein 1B (SPRR1B) NM_003125
Thrombospondin 2 (THBS2) NM_003247
Tumor necrosis factor, alpha-induced protein 2 (TNFAIP2) NM_006291
V-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (KIT) NM_000222
Housekeeping Genes  
Actin, beta (ACTB) NM_001101
Beta-2-microglobulin (B2M) NM_004048
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) NM_002046
Hypoxanthine phosphoribosyltransferase 1 (HPRT1) NM_000194
Ribosomal protein L13a (RPL13A) NM_012423