Skip to main content

Advertisement

Table 1 Alignment accuracy compared to BWA using simulated reads

From: BarraCUDA - a fast short read sequence aligner using graphics processing units

  BWA BarraCUDA
  Gap enabled Gap disabled Gap enabled Gap disabled
Single-end     
% Mapped 89.95 91.01 91.42 91.14
% Error 0.06 0.04 0.05 0.05
Paired-end     
% Mapped 96.53 96.50 96.61 96.64
% Error 0.04 0.04 0.06 0.06