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Table 3 Runtime of BowStrap

From: BowStrap v1.0: Assigning statistical significance to expressed genes using short-read transcriptome data

Dataset Total core hours
50 M 35.5
25 M 9.1
10 M 6.9
1 M 0.8
0.5 M 0.2
  1. BowStrap was used to generate gene model expression values from a synthetic RNAseq data of 50, 25, 10, 1, and 0.5 million total 46-mer sequence reads. “Total Core Hours” indicates total core hours required to perform 1000 bootstrap-style iterations. Multithread BowStrap decreases total time required approximately linearly with number of processors used, but memory required increases linearly.