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Table 3 Characterization of the 46 polymorphic SSR markers

From: Microsatellite marker development for the rubber tree (Hevea brasiliensis): characterization and cross-amplification in wild Hevea species

Primer

NA

size range (bp)

He

Ho

PIC

NA

 

A

    

B

HB 31

6

182-173

0.753

0.6875

0.7001

12

HB 32

6

256-238

0.6057

0.3243

0.524

12

HB 33

9

188-171

0.6808

0.4

0.6388

10

HB 35

3

159-156

0.3882

0.4054

0.3226

5

HB 36

7

239-217

0.6279

0.6111

0.557

16

HB 37

3

161-154

0.6133

0.3235

0.5325

3

HB 41

6

141-173

0.4855

0.3611

0.459

8

HB 42

7

203-216

0.5313

0.5833

0.4954

10

HB 43

10

219-265

0.7531

0.5405

0.7133

15

HB 45

17

155-238

0.856

0.8333

0.8273

21

HB 47

8

152-201

0.6311

0.4722

0.566

14

HB 50

3

196-210

0.2289

0.1944

0.2124

8

HB 51

2

196-201

0.4909

0.1515

0.3666

7

HB 53

8

204-223

0.7871

0.7568

0.7439

13

HB 54

10

168-203

0.6708

0.5294

0.6201

10

HB 55

9

168-192

0.8

0.4571

0.7645

10

HB 57

9

147-176

0.7169

0.6471

0.6831

12

HB 60

5

148-161

0.3154

0.3514

0.2985

6

HB 61

6

150-172

0.7175

0.9167

0.6662

11

HB 62

5

122-112

0.415

0.1081

0.3888

5

HB 63

8

198-236

0.7553

0.5135

0.7082

15

HB 64

8

146-199

0.6221

0.4444

0.5914

12

HB 66

3

273-279

0.2273

0.25

0.2085

4

HB 68

10

138-167

0.8058

0.8286

0.7636

14

HB 69

10

139-172

0.6962

0.6471

0.6426

10

HB 70

5

155-167

0.6928

0.8

0.6281

6

HB 71

2

186-188

0.1037

0.1081

0.097

2

HB 73

6

206-228

0.7754

0.8056

0.729

8

HB 77

4

135-153

0.1788

0.0811

0.1701

8

HB 78

8

186-215

0.7996

0.8286

0.7605

10

HB 81

9

187-220

0.7469

0.5333

0.6979

13

HB 82

4

175-168

0.5572

0.6757

0.4489

8

HB 83

4

181-165

0.5271

0.7143

0.4631

4

HB 92

7

255-229

0.773

0.7576

0.7246

7

HB 95

6

254-225

0.5742

0.5946

0.4793

12

HB 98

3

190-180

0.2787

0.3143

0.2535

4

HB 100

10

250-214

0.803

0.8649

0.7657

16

HB 101

2

142-132

0.2166

0.2432

0.1908

4

HB 102

4

198-157

0.2714

0.2973

0.2568

10

HB 103

2

164-161

0.1037

0.1081

0.097

2

HB 104

5

173-154

0.6711

0.375

0.6119

14

HB 105

13

258-176

0.8629

0.9091

0.8339

21

HB 106

5

210-230

0.5855

0.0909

0.4975

6

HB 109

6

186-210

0.1387

0.1143

0.135

7

HB 110

9

273-256

0.8322

0.6667

0.7981

11

HB 117

8

152-190

0.8052

0.7222

0.7643

12

  1. NA/A, number of alleles in the 36 H. brasiliensis clones; NA/B, the total number of alleles in the 36 H. brasiliensis clones and in the other Hevea species; bp, product size range in base pairs; He, expected heterozygosity; Ho, observed heterozygosity; PIC, polymorphism information content.
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BMC Research Notes

ISSN: 1756-0500

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