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Table 2 Comparison between ClustalW2 and simple sorted alignment strategies in all configurations

From: Effect of positional dependence and alignment strategy on modeling transcription factor binding sites

Species ClustalW2 Superior  Z   p≤ 
    % Cases Alignment   
D. melanogaster          0.980 ClustalW2 5.78 0.01
G. gallus          0.000 Simple sorted 6.03 0.01
H. sapiens          0.540 None 0.50
M. musculus          0.060 Simple sorted 5.28 0.01
R. norvegicus          1.000 ClustalW2 6.03 0.01
S. cerevisiae          0.125 Simple sorted 4.53 0.01