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Table 4 Class-wise performance of ngLOC method on prokaryotic datasets

From: ngLOC: software and web server for predicting protein subcellular localization in prokaryotes and eukaryotes

  

Gram-Negative

Gram-Positive

Localization class

Code

Prec.

Sens.

Spec.

MCC

Prec.

Sens.

Spec.

MCC

Cytoplasm

CYT

0.887

0.992

0.785

0.822

0.888

0.993

0.668

0.755

Extracellular

EXC

0.940

0.597

0.998

0.742

0.899

0.637

0.990

0.731

Inner Membrane

IN

0.908

0.830

0.977

0.835

0.941

0.648

0.993

0.754

Outer Membrane

OUT

0.987

0.680

1.000

0.812

    

Periplasm

PER

0.925

0.561

0.997

0.707

    

Cell Wall

WAL

    

0.786

0.344

0.999

0.516

% Overall accuracy

    

89.78%

   

89.33 %

  1. Prec-precision; Sens-sensitivity; Spec-specificity; MCC-Matthews correlation coefficient.
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BMC Research Notes

ISSN: 1756-0500

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