From: BetaSearch: a new method for querying β-residue motifs
Dataset size | |||||
---|---|---|---|---|---|
Method | 1,000 | 2,000 | 4,000 | 8,000 | 16,000 |
GraphGrepSX,l p =4 | 27s | 57s | 1m 44s | 3m 29s | 7m 43s |
2Mb | 4Mb | 9Mb | 18Mb | 37Mb | |
GraphGrepSX,l p =10 | 49s | 1m 44s | 3m 31s | 7m 09s | 14m 50s |
75 Mb | 142 Mb | 267 Mb | 496 Mb | 925 Mb | |
SING,l p =4 | 34s | 1m 11s | 2m 17s | 4m 29s | 9m 12s |
10 Mb | 21 Mb | 42 Mb | 84 Mb | 169 Mb | |
SING,l p =10 | 4m 05s | 8m 25s | 16m 26s | 32m 16s | 1h 04m 39s |
329 Mb | 636 Mb | 1187 Mb | 2243 Mb | 4279 Mb | |
BetaSearch | 9s | 19s | 56s | 2m 03s | 4m 04s |
10 Mb | 20 Mb | 40 Mb | 81 Mb | 164 Mb |