From: Rapid phylogenetic and functional classification of short genomic fragments with signature peptides
 | This work | MG-RAST | MEGAN | AMPHORA | 16S rRNA |
---|---|---|---|---|---|
Average % reads ID’d as bacteria | 46 | 49 | 63 | 0.3 |  |
Average % bacterial ID’d as actinobacteria | 36.9 | 49.2 | 42.6 | 45.1 | 28.4 |
Difference (CREO2 -1) | −2.6 | −3.6 | −3.5 | −2.2 | −5.1 |
Average % bacterial ID’d as α-proteobacteria | 10.4 | 20.8 | 15.1 | 35.1 | 29.4 |
Difference (CREO2 -1) | +0.5 | +0.9 | +0.7 | +1.1 | +4.0 |
Average % ID’d as cyanobacteria | 0.9 | 2.6 | 1.6 | 0.5 | 4.0 |
Difference (CREO2 - 1) | −0.6 | −0.8 | −0.9 | −0.8 | −2 |