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Table 2 Nucleotide analyses of the constant (CD#) and variable (VD#) domains of the ompA gene

From: Nucleotide and phylogenetic analyses of the Chlamydia trachomatis ompA gene indicates it is a hotspot for mutation

  # nt #Δ nt sites %Δ nt sites dN dS dN/dS ts/tv
CD1 255 19 7.45 0.008 0.092 0.09 1.6
CD2 165 43 26.06 0.024 0.927 0.03 2.7
CD3 189 52 27.51 0.019 0.596 0.03 6.3
CD4 150 26 17.33 0.014 0.421 0.03 2.4
CD5 168 15 8.93 0.004 0.123 0.03 2.1
   CD1-5 927 155 16.72 0.013 0.314 0.04 2.0
VD1 66 58 87.88 0.797 0.962 0.83 0.4
VD2 66 51 77.27 0.640 0.983 0.65 0.9
VD3 42 19 45.24 0.135 0.491 0.27 0.9
VD4 93 58 62.37 0.281 0.648 0.43 1.1
   VD1-4 267 186 69.66 0.404 1.204 0.34 0.7
ompA 1194 341 28.56 0.076 0.419 0.18 1.0