Skip to main content
Figure 4 | BMC Research Notes

Figure 4

From: Structural attributes for the recognition of weak and anomalous regions in coiled-coils of myosins and other motor proteins

Figure 4

COILCHECK + analysis on known long-length coiled-coil structures and structures belonging to DNA binding zipper class proteins. a) COILCHECK + energies of different parts of Sec2p coiled-coil domain is shown. The structure (PDB id 2OCY) is divided into 5 parts based on SOCKET coiled-coil prediction and COILCHECK + energy for each part is identified. It can be clearly seen that the coiled-coil regions are assigned good energies and the break regions have poor energies. b) Beclin1 coiled-coil domain (PDB id 3Q8T), which has continuous heptad pattern, is divided into overlapped three heptad parts and each structure is checked for its COILCHECK + energies. It can be visualized that all the regions are less stable and it also couples with the irregular a-d pairing reported by Li and coworkers.

Back to article page