|
Target
|
Probe
|
Annealing temp(°C)
|
No. of target strains detecteda
|
Sensitivity (%)b
|
No. of non-target strains detecteda
|
Specificity (%)b
|
Reference
|
|---|
|
G. vaginalis
|
Gard154-454
|
60
|
3 (from 3)
|
100.0
|
0 (from 6)
|
100.0
|
This study
|
| | |
62
|
12 (from 12)
|
100.0
|
0 (from 34)
|
100.0
| |
| |
GV1 + 3
|
60
|
3(from 3)
|
100.0
|
0 (from 6)
|
100.0
|
[15]
|
| | |
62
|
10 (from 12)
|
83.3
|
0 (from 34)
|
100.0
| |
| |
Gv1 + 2
|
60
|
3 (from 3)
|
100.0
|
0 (from 6)
|
100.0
|
[13]
|
| | |
62
|
11 (from 12)
|
91.7
|
0 (from 34)
|
100.0
| |
|
A. vaginae
|
Atop109-329
|
60
|
3 (from 3)
|
100.0
|
5 (from 6)
|
16.7
|
This study
|
| | |
62
|
12 (from 12)
|
100.0
|
15 (from 24)
|
37.5
| |
| | |
66
|
12 (from 12)
|
100.0
|
3 (from 34)
|
91.2
| |
| |
AtovagRT3
|
60
|
12 (from 12)
|
100.0
|
1 (from 24)
|
95.8
|
[11]
|
| | |
62
|
12 (from 12)
|
100.0
|
2 (from 34)
|
94.1
| |
| |
Atop167-587
|
60
|
2 (from 3)
|
66.7
|
0 (from 6)
|
100.0
|
[10]
|
| | |
62
|
11 (from 12)
|
91.6
|
4 (from 34)
|
88.3
| |
|
Lactobacillus spp.
|
AM Lacto
|
60
|
2 (from 12)
|
16.7
|
1 (from 24)
|
95.8
|
This study
|
| | |
58
|
2 (from 12)
|
16.7
|
3 (from 34)
|
91.2
| |
| |
New Lacto
|
60
|
5 (from 12)
|
41.7
|
18 (from 34)
|
47,1
|
[16]
|
| | |
62
|
1 (from 12)
|
8.3
|
8 (from 24)
|
66.7
| |
| |
S21 + A19
|
60
|
5 (from 12)
|
41.7
|
24 (from 24)
|
0
|
[17]
|
| | |
62
|
6 (from 12)
|
50.0
|
34 (from 34)
|
0
| |
- aCalculated using ProbeMatch (last accession, May 2012) with the following data set options: Strain – Both; Source – Both; Size – > 1200 bp; Quality – Both.
- bFormula: Specificity = (nts/Tnts)*100 (nts: number of non-target strains undetected, Tnts: total number of non-target strains tested).
- Sensitivity = (ts/Tts)*100 (ts: number of target strains detected, Tts: total number of target strains tested).
