Table 2 Multiple alignment comparison of 10 R protein groups composed by typical resistance domains
From: In silico approach to predict candidate R proteins and to define their domain architecture
Class Name | n. of sequences | Average sequence length | Alignment length | Identity | Identical sites |
|---|---|---|---|---|---|
CNL | 310 | 1014 | 5050 | 16.3% | 0.3% |
RLP | 107 | 651 | 1734 | 17.1% | 0.0% |
TNL | 103 | 1146 | 3717 | 25.6% | 0.1% |
TIR | 82 | 226 | 801 | 29.3% | 0.5% |
NBS-LRR | 45 | 831 | 2750 | 15.4% | 0.4% |
NBS | 37 | 361 | 1070 | 14.5% | 0.1% |
CC-NBS | 30 | 395 | 804 | 16.4% | 0.1% |
TIR-NBS | 22 | 502 | 833 | 31.8% | 1.0% |
PTO-like | 16 | 561 | 921 | 35.7% | 6.0% |
MLO-like | 10 | 427 | 622 | 55.5% | 14.1% |