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Table 2 Most abundantly represented transcripts in a dataset of 7,606 ESTs prepared from a mixed stage unstressed culture of the anhydrobiotic nematode Panagrolaimus superbus.

From: A molecular analysis of desiccation tolerance mechanisms in the anhydrobiotic nematode Panagrolaimus superbus using expressed sequenced tags

Cluster ID Blast Identity [Organism] Accession Number* § BLAST Score & E value Number of ESTs (Percentage of Total EST Dataset)
PSC00077 Immunodominant antigen (SXP/RAL-2 protein) [Ancylostoma caninum] ABD98404.1 304 3e-26 79 (1.04)
PSC00006 No significant similarity found - - - 71 (0.93)
PSC00009 No significant similarity found - - - 70 (0.92)
PSC00076 No significant similarity found - - - 54 (0.71)
PSC00137 No significant similarity found - - - 49 (0.64)
PSC00511 Major sperm protein [Caenorhabditis elegans] NP_494858.1 635 1e-64 40 (0.53)
PSC00155 Hypothetical protein (Y105C5A.8) [C. elegans] NP_001041003 430 1e-40 39 (0.51)
PSC00051 No significant similarity found - - - 35 (0.46)
PSC01915 Major sperm protein [C. elegans] NP_494858.1 640 3e-65 30 (0.39)
PSC00043 Yolk protein (vitellogenin) (CEW1-vit-6) [Oscheius sp.] U35449 280 6e-23 29 (0.38)
PSC00163 No significant similarity found - - - 29
PSC00182 No significant similarity found - - - 29
PSC00025 No significant similarity found - - - 28 (0.37)
PSC00165 Major sperm protein [C. elegans] NP_494858.1 640 3e-65 27 (0.35)
PSC00883 No significant similarity found - - - 27
PSC00633 No significant similarity found - - - 26 (0.34)
PSC00187 Lysosomal protein (heh-1) [C. elegans] NP_497671.2 295 3e-25 25 (0.33)
PSC00252 Expressed sequence tag [Meloidogyne chitwoodi] MCP06382§ 358 2e-32 25
PSC00203 No significant similarity found - - - 25
PSC00316 No significant similarity found - - - 25
PSC00610 No significant similarity found - - - 24 (0.31)
PSC00167 Vitellogenin (vit-5) [C. elegans] NP_508589 238 2e-18 23 (0.30)
PSC00241 No significant similarity found - - - 22 (0.29)
PSC00429 No significant similarity found - - - 22
PSC00179 Major sperm protein [C. elegans] NP_501781.1 634 1e-64 21 (0.28)
PSC00876 Lipid binding protein (lbp-3) [C. elegans] NP_001041249 360 9e-33 21
PSC00004 No significant similarity found - - - 21
PSC00010 No significant similarity found - - - 21
PSC00566 Major sperm protein [C. elegans] NP_494898 633 2e-64 20 (0.26)
PSC00265 60S ribosomal protein L7a [Loa loa] XP_003139379.1 883 e-93 19 (0.25)
PSC00457 Actin family member [Panagrellus redivivus] AAM47606.1 1187 3e-148 19
PSC00015 Histone H4d [Xenopus laevis] NP_001128541.1 469 2e-45 17 (0.22)
PSC00128 Cytochrome c oxidase subunit 1 [Chabertia ovina] YP_003434131.1 1300 3e-141 17
PSC00326 Major sperm protein [B. malayi] XP_001902608.1 210 2e-15 17
PSC00122 No significant similarity found - - - 17
PSC00047 60S ribosomal protein L37a [B. malayi] XP_001902009.1 416 3e-39 16 (0.21)
PSC00764 Expressed sequence tag [M. chitwoodi] MCP06382_1§ 522 4e-51 16
PSC00097 No significant similarity found - - - 16
PSC00962 Expressed sequence tag[Angiostrongylus cantonensis] AAC00593_1§ 198 6e-14 15 (0.19)
PSC00184 Major sperm protein [Dictyocaulus viviparus] ABW37697.1 624 2e-63 15
PSC00064 Eukaryotic elongation factor 1A [B. xylophilus] ACZ13348.1 1,348 8e-147 15
PSC00486 Major sperm protein [C. elegans] NP_494858.1 640 3e-65 15
PSC00127 No significant similarity found - - - 15
PSC00725 No significant similarity found - - - 15
  1. The consensus sequence for each EST was translated using prot4EST [46] and was then subjected to a BLASTP search against a non-redundant custom database comprising NCBI (nr), NemPep + and WormPep sequences
  2. * NCBI (nr) accession numbers are given when available
  3. §Three unigenes had hits only to NemPep EST sequences from the NEMBASE4 database