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Figure 4 | BMC Research Notes

Figure 4

From: Validation of MIMGO: a method to identify differentially expressed GO terms in a microarray dataset

Figure 4

Detailed validation of results from GSEA + MIMGO for three GO terms. Detailed results from GSEA + MIMGO for three GO terms (A, S phase; B, Cellular cell wall organization; C, Regulation of cell shape) are shown. Each (I) in A–C shows the correlation coefficient between “GSEA + MIMGO” and “> (avg + std)” in Figure 3C for the three GO terms at each GSEA q-value threshold. Each (II) in A–C describes the average expression of genes annotated with the three GO terms in each microarray result (i.e., 0–119 min). The upper and lower diagrams in each (III) describe the matrices of Figure 3C and3A, respectively, for the three GO terms at a GSEA q-value threshold of 0.02. The upper and lower diagrams in each (IV) depict the matrices of Figures 3C and3A, respectively, for the three GO terms at a GSEA q-value threshold of 0.2. The 0, 7, 14, etc. in (III) and (IV) denote the recovery time-point labels for each microarray result.

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