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Table 3 Main average indices in different sequencing strategies for 100 genomes (200 bp read length, 8 kb paired end library)

From: A cost-effective and universal strategy for complete prokaryotic genomic sequencing proposed by computer simulation

ST GCE(%) SBE(%) IDR(%) FLT(%) FDT(%) CN NB SN
6 × SE + 10 × PE 98.17144 0.003195 0.000334 0.4401864 0.2416131 61.15 253000.7 3.625
10 × SE + 10 × PE 98.15661 0.004024 0.000317 0.4076573 0.2861061 54.33 290749.3 3.7188
15 × SE + 10 × PE 98.16915 0.004743 0.000305 0.3916122 0.261398 53.47 301038.3 3.64
20 × SE + 10 × PE 98.17177 0.004877 0.000309 0.409125 0.2509012 52.98 289864.6 3.6
  1. ST: Sequencing Strategy
  2. SE: Single end reads
  3. PE: paired end reads
  4. GOE: Genome Coverage Rate
  5. SBE: Single Base Error Rate
  6. IDR: Indel Error Rate
  7. FLT: False Gene Duplication Rate
  8. FDT: False Gene Loss Rate
  9. CN: Contig Number